DNBSEQ-G400 paired end sequencing of SAMD00647305 - SRA

DRX489537: DNBSEQ-G400 paired end sequencing of SAMD00647305
1 DNBSEQ (DNBSEQ-G400) run: 19.7M spots, 5.9G bases, 4Gb downloads

Submitted by: RIKEN_CSRS

Study: Transcriptome, Metabolome, and Hormonome Analyses of Rice Calli

PRJDB16708 • DRP012054 • All experiments • All runs

show Abstracthide Abstract

We conducted multiomics studies on cultivated rice (Oryza sativa ssp. japonica) calli at various timepoints and culture conditions.

Sample: h_Os_4wk2

SAMD00647305 • DRS407568 • All experiments • All runs

Organism: Oryza sativa Japonica Group

Library:

Name: h_Os_4wk2

Instrument: DNBSEQ-G400

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: Oligo-dT

Layout: PAIRED

Construction protocol: RNA was harvested using Rneasy mini plus kit (Qiagen). 2~5 ug of total RNA was used for the construction of sequencing libraries. RNA libraries for RNA-seq were prepared using NEXTflex Rapid Directional RNA-seq kit (v2.0; PerkinElmer) following manufacturer's protocols.

Runs: 1 run, 19.7M spots, 5.9G bases, 4Gb

Run	# of Spots	# of Bases	Size	Published
DRR505627	19,710,787	5.9G	4Gb	2024-09-25

ID:: 35358866

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Recent activity